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5OLJ

Crystal structure of Porphyromonas gingivalis dipeptidyl peptidase 4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsXenocs GeniX 3D Cu HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2011-07-09
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths109.100, 109.100, 157.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.870 - 2.200
R-factor0.22502
Rwork0.224
R-free0.25451
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5kby
RMSD bond length0.014
RMSD bond angle1.634
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 Overall
Low resolution limit [Å]38.000
High resolution limit [Å]2.200
Number of reflections48811
<I/σ(I)>10.8
Completeness [%]99.7
Redundancy9.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29010% (w/v) PEG 8000, 20% (v/v) ethylene glycol, 0.02 M sodium L-glutamate, 0.02 M DL-alanine, 0.02 M glycine, 0.02 M DL-lysine, 0.02 M DLserine, and 0.1 M BICINE/TRIS pH 8.5

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