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5OHI

Crystal structure of autotaxin in complex with BI-2545

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-12
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.90996
Spacegroup nameP 1 21 1
Unit cell lengths61.057, 93.779, 75.695
Unit cell angles90.00, 94.91, 90.00
Refinement procedure
Resolution39.820 - 1.660
R-factor0.171
Rwork0.170
R-free0.20000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3nkm
RMSD bond length0.008
RMSD bond angle0.960
Data reduction softwareXDS (May 1 2016)
Data scaling softwareautoPROC (1.1.7)
Phasing softwarePHASER (2.5.7)
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.4171.722
High resolution limit [Å]1.6601.662
Rmerge0.0643.334
Rpim0.0402.180
Number of reflections98475188
<I/σ(I)>11.30.39
Completeness [%]69.12
Redundancy3.53.3
CC(1/2)0.9980.079
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82981 %w/v Polyvinylpyrolidine (PVP K15)21 %w/v Polyethylene glycol 3,350, 0.2 M ZnSO4, 0.5 M KSCN and 0.1 M BIS-TRIS at pH8.0

220113

PDB entries from 2024-05-22

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