5OHI
Crystal structure of autotaxin in complex with BI-2545
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.90996 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.057, 93.779, 75.695 |
Unit cell angles | 90.00, 94.91, 90.00 |
Refinement procedure
Resolution | 39.820 - 1.660 |
R-factor | 0.171 |
Rwork | 0.170 |
R-free | 0.20000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nkm |
RMSD bond length | 0.008 |
RMSD bond angle | 0.960 |
Data reduction software | XDS (May 1 2016) |
Data scaling software | autoPROC (1.1.7) |
Phasing software | PHASER (2.5.7) |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.417 | 1.722 |
High resolution limit [Å] | 1.660 | 1.662 |
Rmerge | 0.064 | 3.334 |
Rpim | 0.040 | 2.180 |
Number of reflections | 98475 | 188 |
<I/σ(I)> | 11.3 | 0.39 |
Completeness [%] | 69.1 | 2 |
Redundancy | 3.5 | 3.3 |
CC(1/2) | 0.998 | 0.079 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 1 %w/v Polyvinylpyrolidine (PVP K15)21 %w/v Polyethylene glycol 3,350, 0.2 M ZnSO4, 0.5 M KSCN and 0.1 M BIS-TRIS at pH8.0 |