Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NZX

Crystal structure of DNA cross-link repair protein 1A in complex with Ceftriaxone (alternative site)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths51.450, 56.550, 113.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.860 - 1.470
R-factor0.16964
Rwork0.168
R-free0.20666
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5aho
RMSD bond length0.008
RMSD bond angle1.346
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.4301.460
High resolution limit [Å]1.4201.420
Rmerge0.0360.985
Rpim0.0230.787
Number of reflections616863618
<I/σ(I)>17.61.1
Completeness [%]97.578.8
Redundancy5.83.4
CC(1/2)1.0000.512
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP627830 % PEG 1000, 0.1 M MIB buffer pH 6.0

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon