5NVA
Substrate-bound outward-open state of a Na+-coupled sialic acid symporter reveals a novel Na+-site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 48.788, 97.764, 151.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.176 - 2.260 |
R-factor | 0.2264 |
Rwork | 0.224 |
R-free | 0.26080 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.506 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 82.180 |
High resolution limit [Å] | 2.260 |
Number of reflections | 33923 |
<I/σ(I)> | 8.39 |
Completeness [%] | 96.6 |
Redundancy | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293.15 | 0.1M sodium citrate pH5, 0.2-0.25M potassium chloride, 30-40% (w/v) pentaerythritol propoxylate (5/4/PO/OH) |