5NPU
Inferred ancestral pyruvate decarboxylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-26 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 108.330, 108.330, 322.651 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 81.100 - 3.500 |
R-factor | 0.2496 |
Rwork | 0.246 |
R-free | 0.31860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wvg |
RMSD bond length | 0.007 |
RMSD bond angle | 0.752 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | BALBES |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 93.820 | 3.710 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.241 | 0.965 |
Number of reflections | 28526 | 4512 |
<I/σ(I)> | 5.6 | 1.5 |
Completeness [%] | 99.5 | 99.9 |
Redundancy | 4.4 | 4.6 |
CC(1/2) | 0.965 | 0.422 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.15 M sodium citrate pH 5.5, 14%(w/v) PEG 3350 |