5NN1
The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 33.216, 93.353, 36.395 |
Unit cell angles | 90.00, 102.04, 90.00 |
Refinement procedure
Resolution | 46.676 - 1.785 |
R-factor | 0.2069 |
Rwork | 0.205 |
R-free | 0.24460 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.080 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 93.353 | 1.791 |
High resolution limit [Å] | 1.785 | 1.785 |
Rmerge | 0.042 | 0.576 |
Rpim | 0.021 | 0.294 |
Number of reflections | 20634 | 202 |
<I/σ(I)> | 16.2 | |
Completeness [%] | 100.0 | 95.3 |
Redundancy | 4.4 | 4.8 |
CC(1/2) | 0.999 | 0.809 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 298 | 200 mM Na/K Tartrate, 10-20% PEG3350 |