5NMT
Dimer structure of Sortilin ectodomain crystal form 1, 2.3A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06SA |
| Synchrotron site | SLS |
| Beamline | X06SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-03-30 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.99998 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 97.020, 131.130, 154.630 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 69.637 - 2.300 |
| R-factor | 0.2056 |
| Rwork | 0.205 |
| R-free | 0.23390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3f6k |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.633 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11_2567: ???)) |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 69.640 |
| High resolution limit [Å] | 2.300 |
| Rmerge | 0.103 |
| Rmeas | 0.115 |
| Rpim | 0.061 |
| Number of reflections | 87510 |
| <I/σ(I)> | 9.8 |
| Completeness [%] | 99.4 |
| Redundancy | 6.3 |
| CC(1/2) | 0.996 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 291 | 0.18 M Magnesium formate dihydrate pH 7.0, 18 % PEG 3350 (w/v), 10 mM TCEP hydrochloride |






