5NIA
Crystal structure of human LTA4H mutant D375N in open conformation (crystal form I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | H 3 |
Unit cell lengths | 153.000, 153.000, 74.880 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.167 - 1.764 |
R-factor | 0.1816 |
Rwork | 0.180 |
R-free | 0.20740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ni2 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.229 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.167 | 1.827 |
High resolution limit [Å] | 1.764 | 1.764 |
Rmerge | 0.104 | 1.785 |
Rpim | 0.043 | 0.752 |
Number of reflections | 64241 | 6342 |
<I/σ(I)> | 9.28 | 1.02 |
Completeness [%] | 99.8 | 98.28 |
Redundancy | 6.8 | 6.4 |
CC(1/2) | 0.998 | 0.394 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 8% (w/v) PEG 20 000, 15% (w/v) PEG MME 550, 100 mM Hepes/MOPS pH 7.7-8.0, 15 mM CaCl2, 15 mM MgCl2 |