5NGE
Crystal structure of USP7 in complex with the non-covalent inhibitor, FT671
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-06 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 71.280, 70.300, 78.560 |
Unit cell angles | 90.00, 97.17, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.350 |
R-factor | 0.21734 |
Rwork | 0.214 |
R-free | 0.27214 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nb8 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.574 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.950 | 2.390 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.052 | 0.719 |
Number of reflections | 31221 | |
<I/σ(I)> | 14.9 | |
Completeness [%] | 96.6 | 97.3 |
Redundancy | 3.3 | 3.4 |
CC(1/2) | 0.588 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 25% (w/v) polyethylene glycol (PEG) 1500, 100 mM MMT pH 8.0 |