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5NFX

Deinococcus radiodurans BphP PAS-GAF Y263F mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
Collection date2015-10-09
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.87260
Spacegroup nameC 1 2 1
Unit cell lengths94.240, 54.580, 70.560
Unit cell angles90.00, 92.20, 90.00
Refinement procedure
Resolution19.930 - 1.340
R-factor0.1451
Rwork0.143
R-free0.18230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2o9c
RMSD bond length0.014
RMSD bond angle1.754
Data reduction softwareXDS
Data scaling softwareXSCALE (Nov 1, 2016)
Phasing softwarePHASER (2.5.6)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.93019.9301.380
High resolution limit [Å]1.34015.0001.340
Rmerge0.0590.0331.333
Rmeas0.0680.0401.538
Total number of observations331083
Number of reflections80229385970
<I/σ(I)>10.5133.750.89
Completeness [%]99.855.199.7
Redundancy4.1273.2893.943
CC(1/2)0.9980.9990.311
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.95293sodium acetate, PEG 400, DTT, 2-methyl-2,4-pentanediol

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PDB entries from 2024-09-04

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