5NFX
Deinococcus radiodurans BphP PAS-GAF Y263F mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.87260 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 94.240, 54.580, 70.560 |
Unit cell angles | 90.00, 92.20, 90.00 |
Refinement procedure
Resolution | 19.930 - 1.340 |
R-factor | 0.1451 |
Rwork | 0.143 |
R-free | 0.18230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2o9c |
RMSD bond length | 0.014 |
RMSD bond angle | 1.754 |
Data reduction software | XDS |
Data scaling software | XSCALE (Nov 1, 2016) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.930 | 19.930 | 1.380 |
High resolution limit [Å] | 1.340 | 15.000 | 1.340 |
Rmerge | 0.059 | 0.033 | 1.333 |
Rmeas | 0.068 | 0.040 | 1.538 |
Total number of observations | 331083 | ||
Number of reflections | 80229 | 38 | 5970 |
<I/σ(I)> | 10.51 | 33.75 | 0.89 |
Completeness [%] | 99.8 | 55.1 | 99.7 |
Redundancy | 4.127 | 3.289 | 3.943 |
CC(1/2) | 0.998 | 0.999 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.95 | 293 | sodium acetate, PEG 400, DTT, 2-methyl-2,4-pentanediol |