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5NE3

L2 class A serine-beta-lactamase complexed with avibactam

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2016-08-05
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97949
Spacegroup nameP 21 21 21
Unit cell lengths69.492, 84.305, 93.668
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.623 - 1.350
R-factor0.1626
Rwork0.162
R-free0.17810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ne2
RMSD bond length0.011
RMSD bond angle1.349
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]53.6231.370
High resolution limit [Å]1.3501.350
Rpim0.0530.806
Number of reflections116868
<I/σ(I)>9.81.3
Completeness [%]96.894.2
Redundancy11.59.9
CC(1/2)0.9980.616
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.15Crystal reagent (1.5 uL): 10% w/v PEG 20000, 20% v/v PEG MME 550, 0.02 M DL-Glutamic acid; 0.02 M DL-Alanine; 0.02 M Glycine; 0.02 M DL-Lysine; 0.02 M DL-Serine, 0.1 M bicine/Trizma base pH 8.5 Protein (1 uL): 42 mg/ml, 50 mM Tris pH 7.5, 150 mM NaCl, 5 mM imidazole, 1 mM TCEP

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