5N5Q
Human TTR altered conformation from soaking in iron chloride.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 2 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-07-16 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.73915 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 42.730, 81.810, 69.460 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 40.900 - 2.530 |
| R-factor | 0.19508 |
| Rwork | 0.192 |
| R-free | 0.25252 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5k1j |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.604 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.680 |
| High resolution limit [Å] | 2.530 | 2.530 |
| Rmerge | 0.200 | 1.980 |
| Number of reflections | 15593 | 2460 |
| <I/σ(I)> | 8.28 | 0.83 |
| Completeness [%] | 99.2 | 95.3 |
| Redundancy | 13.21 | 12.2 |
| CC(1/2) | 0.996 | 0.300 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | protein: 10 mg/ml Dialysed in 100 milli-M NaCl, 50 milli-M sodium acetate, pH 5.5 precipitant: 27 % polyethylene glycol 4,000, 0.2 M imidazole malate, pH 6.0. cryosoak: 40% SM3 (, 25 % MPEG 5K, 25 % diethylene glycol + 25 % ethylene glycol + 25 % glycerol + 25 % 1,4-dioxane) 25 % MPEG 5K, 0.1 M CHC (citric acid, HEPES, CHES: 90 % acid /10 % basic), 30 mM FeCl2, 2 h soak. |






