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5N5Q

Human TTR altered conformation from soaking in iron chloride.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-07-16
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.73915
Spacegroup nameP 21 21 2
Unit cell lengths42.730, 81.810, 69.460
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.900 - 2.530
R-factor0.19508
Rwork0.192
R-free0.25252
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5k1j
RMSD bond length0.013
RMSD bond angle1.604
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.680
High resolution limit [Å]2.5302.530
Rmerge0.2001.980
Number of reflections155932460
<I/σ(I)>8.280.83
Completeness [%]99.295.3
Redundancy13.2112.2
CC(1/2)0.9960.300
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6293protein: 10 mg/ml Dialysed in 100 milli-M NaCl, 50 milli-M sodium acetate, pH 5.5 precipitant: 27 % polyethylene glycol 4,000, 0.2 M imidazole malate, pH 6.0. cryosoak: 40% SM3 (, 25 % MPEG 5K, 25 % diethylene glycol + 25 % ethylene glycol + 25 % glycerol + 25 % 1,4-dioxane) 25 % MPEG 5K, 0.1 M CHC (citric acid, HEPES, CHES: 90 % acid /10 % basic), 30 mM FeCl2, 2 h soak.

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