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5N0A

Crystal structure of A259C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]173
Detector technologyPIXEL
Collection date2015-03-12
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.984
Spacegroup nameP 2 21 21
Unit cell lengths58.774, 182.301, 208.725
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 3.900
R-factor0.2861
Rwork0.285
R-free0.30000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4UTA;4UT7
RMSD bond length0.007
RMSD bond angle1.130
Data reduction softwareXDS
Data scaling softwareAimless
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0004.100
High resolution limit [Å]3.9003.900
Rmerge0.3160.800
Rmeas0.410
Rpim0.2570.670
Number of reflections191124789
<I/σ(I)>3.11.4
Completeness [%]96.997.5
Redundancy3.83.8
CC(1/2)0.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293100mM Hepes pH 7.5, 19% PEG 6K, 1.5% (v/v) 2-methyl-2,4-pentanediol

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