5MZV
IL-23:IL-23R:Nb22E11 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.219, 112.190, 109.870 |
Unit cell angles | 90.00, 106.24, 90.00 |
Refinement procedure
Resolution | 76.851 - 2.800 |
R-factor | 0.2137 |
Rwork | 0.212 |
R-free | 0.25040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | hybrid model of IL23 from 4OE8 in complex with nanobody 22E11 from 4GRW |
RMSD bond length | 0.003 |
RMSD bond angle | 0.635 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX ((dev_2614: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.000 | 2.870 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmeas | 0.081 | 0.547 |
Number of reflections | 38061 | 2797 |
<I/σ(I)> | 12.45 | 2.71 |
Completeness [%] | 98.4 | 99.1 |
Redundancy | 3.45 | 3.53 |
CC(1/2) | 0.997 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 287 | 200 mM magnesium chloride, 100 mM Tris, 11 % (w/v) PEG8000 |