Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MLZ

Dolichyl phosphate mannose synthase in complex with GDP and Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-09-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97857
Spacegroup nameC 2 2 21
Unit cell lengths90.870, 146.210, 95.350
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.016 - 2.000
R-factor0.2418
Rwork0.241
R-free0.25710
Structure solution methodMIR
RMSD bond length0.005
RMSD bond angle1.051
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareautoSHARP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.9502.100
High resolution limit [Å]2.0002.000
Number of reflections43116
<I/σ(I)>29.22.2
Completeness [%]99.899.5
Redundancy13.3
CC(1/2)0.876
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52770.2 M potassium chloride, 0.1 M trisodium citrate (pH 5.5), 37% (v/v) pentaerythritol propoxylate (5/4 PO/OH), 50 mM Hepes (pH 7.5), 150 mM NaCl, 10% (v/v) glycerol, 0.05% LDAO, 5 mM GDP, 5 mM MgCl2

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon