5MK1
Crystal structure of the His Domain Protein Tyrosine Phosphatase (HD-PTP/PTPN23) Bro1 domain (CHMP4A peptide complex structure)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 71.458, 73.669, 79.383 |
Unit cell angles | 114.43, 90.28, 104.20 |
Refinement procedure
Resolution | 28.410 - 2.500 |
R-factor | 0.1779 |
Rwork | 0.176 |
R-free | 0.22630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rau |
RMSD bond length | 0.007 |
RMSD bond angle | 1.232 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11_2563: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.410 | 2.589 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.134 | 0.799 |
Number of reflections | 47548 | |
<I/σ(I)> | 7.9 | 1.94 |
Completeness [%] | 93.0 | 84.76 |
Redundancy | 3.5 | 3.5 |
CC(1/2) | 0.989 | 0.442 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 277 | 0.1 M Tris pH 7.8, 5% (poly-glutamic acid low molecular weight polymer) 20% PEG3350 |