Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MJV

Rebuild and re-refined model for Human Parechovirus 1

Replaces:  5M74
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-11-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97857
Spacegroup nameP 63 2 2
Unit cell lengths399.500, 399.500, 332.860
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution345.977 - 3.090
R-factor0.2584
Rwork0.258
R-free0.26120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bev
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareCNS (1.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]345.9773.150
High resolution limit [Å]3.0903.100
Rmerge0.3540.904
Number of reflections233083
<I/σ(I)>50.9
Completeness [%]78.231.8
Redundancy5.41.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1M TRIS PH 8.0, 0.6M AMMONIUM SULFATE, 0.1M MGCL2, 5% (W/V) GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon