Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M2Z

Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97928
Spacegroup nameP 65
Unit cell lengths234.578, 234.578, 406.123
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.323 - 4.800
R-factor0.2419
Rwork0.241
R-free0.26570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5m2x
RMSD bond length0.002
RMSD bond angle0.530
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.11_2567: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.0705.060
High resolution limit [Å]4.8004.800
Rmerge0.1591.495
Number of reflections61390
<I/σ(I)>5.9
Completeness [%]99.799.4
Redundancy3.33.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP290100 mM Sodium Acetate, 1 M di-potassium hydrogen phosphate, 0.95 M sodium di-hydrogen phosphate.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon