5LWB
Crystal structure of human JARID1B in complex with S40650a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97949 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 142.360, 142.360, 151.540 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 71.180 - 2.390 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.21770 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.164 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1682) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.770 | 2.450 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.137 | 2.338 |
Number of reflections | 36414 | |
<I/σ(I)> | 18.8 | 1.4 |
Completeness [%] | 99.9 | 99.6 |
Redundancy | 19.4 | 18.6 |
CC(1/2) | 0.632 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.1M HEPES pH 7.5, 0.8M Pottassium Phosphate- dibasic, 0.8M Sodium Phosphate monobasic |