5LNW
Crystal structure of Arabidopsis thaliana Pdx1-I320-G3P complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-09-05 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97525 |
Spacegroup name | H 3 |
Unit cell lengths | 178.261, 178.261, 115.309 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.565 - 1.900 |
R-factor | 0.1826 |
Rwork | 0.181 |
R-free | 0.21950 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.006 |
RMSD bond angle | 0.934 |
Data scaling software | Aimless (0.5.15) |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.570 | 44.570 | 1.930 |
High resolution limit [Å] | 1.900 | 10.410 | 1.900 |
Rmerge | 0.123 | 0.144 | 0.861 |
Rmeas | 0.145 | 0.168 | 1.047 |
Rpim | 0.074 | 0.083 | 0.585 |
Total number of observations | 345059 | 2074 | 15929 |
Number of reflections | 107077 | ||
<I/σ(I)> | 6.1 | 13.2 | 1.3 |
Completeness [%] | 99.4 | 95.2 | 97.8 |
Redundancy | 3.2 | 3.3 | 3 |
CC(1/2) | 0.977 | 0.946 | 0.447 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 0.1 M Tris pH8.5, 0.2 M sodium acetate pH5.5, 10%(w/v) PEG4000 |