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5LHY

PB3 Domain of Human PLK4 (apo)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2016-03-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9762
Spacegroup nameP 43 21 2
Unit cell lengths220.350, 220.350, 325.730
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution104.367 - 3.310
R-factor0.2705
Rwork0.269
R-free0.29520
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Chainsaw model based on 1MBY
RMSD bond length0.002
RMSD bond angle0.528
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]110.180
High resolution limit [Å]3.3103.310
Rmerge1.353
Number of reflections119458
<I/σ(I)>16.6
Completeness [%]100.0
Redundancy9.7
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP292100 nl protein solution (52.3 mg/ml protein in 20 mM Tris pH 7.5, 150 mM NaCl, 2 mM DTT) and 100 nl mother liquor (32.27% v/v PPG400, 100 mM NaCl, 50 mM MgCl2, unbuffered)

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