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5KTI

Structure of cow mincle complexed with KMJ1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-01-24
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97946
Spacegroup nameP 31 2 1
Unit cell lengths98.348, 98.348, 45.666
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.460 - 1.800
R-factor0.1792
Rwork0.178
R-free0.20420
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4zrw
RMSD bond length0.015
RMSD bond angle0.913
Data reduction softwareXDS
Data scaling softwareAimless (0.5.17)
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]33.46033.4601.830
High resolution limit [Å]1.8008.9901.800
Rmerge0.0560.0330.535
Number of reflections23855
<I/σ(I)>14.5
Completeness [%]99.598.594.2
Redundancy54.84.8
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8295protein solution: 10 mg/mL mincle, 5 mM CaCl2, 10 mM Tris (pH 8.0), 25 mM NaCl and 5 mM KMJ-1. Reservoir solution: 20% Peg 4K, 20% 2-Propanol and 0.1 M Sodium Acetate pH=5.6

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