Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KO8

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (I-Tyr)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2015-04-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameP 64 2 2
Unit cell lengths152.718, 152.718, 87.286
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.180 - 2.150
R-factor0.1926
Rwork0.191
R-free0.23190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gb5
RMSD bond length0.005
RMSD bond angle0.842
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]38.180
High resolution limit [Å]2.150
Rmerge0.145
Number of reflections33077
<I/σ(I)>16.8
Completeness [%]99.9
Redundancy19.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298100 mM HEPES pH 7.5, 150 mM MgCl2, 25% (w/v) PEG 3350, 2 mM I-Tyr and 15% glycerol

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon