5KMW
TOHO1 Beta lactamase mutant E166A/R274N/R276N -benzyl penicillin complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 15 |
Detector technology | CCD |
Collection date | 2015-05-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.67 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 72.262, 72.262, 98.193 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 10.000 - 1.100 |
R-factor | 0.136 |
R-free | 0.17000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
Data scaling software | XDS (BUILT=20160617) |
Phasing software | SHELX |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.620 | 1.160 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.093 | 0.400 |
Number of reflections | 118234 | |
<I/σ(I)> | 5.6 | 2.1 |
Completeness [%] | 99.7 | 98.6 |
Redundancy | 5.5 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 6.1 | 293.15 | 30 microliters of 10 mg/ml protein concentration was added to a solution containing 2.0 M ammonium sulfate and 0.1 M sodium citrate (pH 6.1). For ligand soaking, crystals were placed for 2-3 h in a reservoir solution containing 2.7 M ammonium sulfate, 0.1 M sodium citrate (pH 6.1), and 5.0 mM benzyl penicillin. The crystals were then placed momentarily in a reservoir solution containing a cryoprotectant (30% w/v trehalose) and subsequently flash-frozen in liquid nitrogen |