5KKP
Crystal Structure of Human Pseudouridylate Synthase 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-03 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.97901 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.356, 73.400, 138.179 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.360 - 2.260 |
R-factor | 0.21 |
Rwork | 0.209 |
R-free | 0.26300 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.080 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | RESOLVE |
Refinement software | BUSTER-TNT (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.300 |
High resolution limit [Å] | 2.260 | 6.130 | 2.260 |
Rmerge | 0.101 | 0.074 | 0.823 |
Rmeas | 0.105 | ||
Rpim | 0.028 | ||
Total number of observations | 364318 | ||
Number of reflections | 27643 | ||
<I/σ(I)> | 6.9 | ||
Completeness [%] | 99.6 | 99.9 | 95.3 |
Redundancy | 13.2 | 12.1 | 8.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 23% PEG 3350, 0.2 M Sodium formate, pH7.0 |