Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KHJ

HCN2 CNBD in complex with uridine-3', 5'-cyclic monophosphate (cUMP)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2012-10-31
DetectorPSI PILATUS 6M
Wavelength(s)1.033180
Spacegroup nameP 2 21 21
Unit cell lengths46.486, 89.925, 98.421
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.690 - 2.010
R-factor0.185
Rwork0.181
R-free0.25180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1q5o
RMSD bond length0.017
RMSD bond angle1.799
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.69028.6752.130
High resolution limit [Å]2.0105.9102.010
Rmerge0.0630.0360.353
Number of reflections27507
<I/σ(I)>7.3517.22
Completeness [%]95.186.194.3
Redundancy1.54
CC(1/2)0.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.6277200 mM NaCl, 0.1 mM sodium citrate pH 4.6, 13% PEG 400

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon