5KE9
mouse Klf4 E446P ZnF1-3 and TpG/CpA sequence DNA complex structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-04 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 51.440, 51.440, 130.594 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.235 - 2.336 |
R-factor | 0.217 |
Rwork | 0.214 |
R-free | 0.27180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m9e |
RMSD bond length | 0.005 |
RMSD bond angle | 0.561 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2400: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.235 | 2.520 |
High resolution limit [Å] | 2.336 | 2.420 |
Rmerge | 0.099 | 0.887 |
Number of reflections | 7979 | |
<I/σ(I)> | 16.6 | 4.06 |
Completeness [%] | 99.5 | 100 |
Redundancy | 10.7 | 10 |
CC(1/2) | 0.919 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | 0.1M Tris-HCl pH8.5 , 0.25M NaCl and 20% polyethylene glycol 8000 |