5KBY
Crystal structure of dipeptidyl peptidase IV in complex with SYR-472
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-04-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 121.573, 122.165, 143.704 |
Unit cell angles | 90.00, 114.57, 90.00 |
Refinement procedure
Resolution | 34.570 - 2.240 |
R-factor | 0.1764 |
Rwork | 0.174 |
R-free | 0.21500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3g0b |
RMSD bond length | 0.007 |
RMSD bond angle | 1.246 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0025) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.300 |
High resolution limit [Å] | 2.250 | 5.550 | 2.250 |
Rmerge | 0.083 | 0.031 | 0.541 |
Total number of observations | 712558 | ||
Number of reflections | 178650 | ||
<I/σ(I)> | 9.5 | ||
Completeness [%] | 98.9 | 99.9 | 88.8 |
Redundancy | 4 | 4.2 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 22.2% PEG MME 2000, 0.1M Bicine pH 8.5 |