5K1V
Crystal structure of Endoplasmic Reticulum aminopeptidase 2 (ERAP2) in complex with a diaminobenzoic acid derivative ligand.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-08-30 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 74.403, 135.171, 127.489 |
| Unit cell angles | 90.00, 90.15, 90.00 |
Refinement procedure
| Resolution | 48.345 - 2.897 |
| R-factor | 0.2085 |
| Rwork | 0.205 |
| R-free | 0.27300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ab0 |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.379 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.470 | 3.050 |
| High resolution limit [Å] | 2.897 | 2.900 |
| Rmerge | 0.062 | 0.670 |
| Number of reflections | 108521 | |
| <I/σ(I)> | 17.8 | 2.3 |
| Completeness [%] | 99.7 | 98.2 |
| Redundancy | 5.1 | 4.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.2 | 277 | 9 %(w/v) PEG 8000, 20 %(v/v) ethylene glycol, 69 mM 2-(N-morpholino)ethanesulfonic acid (MES), 31 mM imidazole |
