Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5K16

Crystal structure of free Ubiquitin-specific protease 12

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2013-05-15
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths52.396, 109.636, 134.193
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.451 - 2.599
R-factor0.1927
Rwork0.190
R-free0.24590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3m99
RMSD bond length0.010
RMSD bond angle1.232
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_1760)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.640
High resolution limit [Å]2.5992.599
Rmerge0.0910.740
Number of reflections24515
<I/σ(I)>14.31.4
Completeness [%]99.999.9
Redundancy44
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72770.1 M Tris-HCl, 18% PEG 3350, 0.2 M Lithium Sulfate

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon