5JP9
Crystal Structure of cytidine monophosphate hydroxymethylase MilA with dCMP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-12-01 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97912 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 109.298, 109.298, 113.155 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.210 - 2.101 |
| R-factor | 0.1574 |
| Rwork | 0.155 |
| R-free | 0.20630 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5jnh |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.862 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.180 |
| High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
| Rmerge | 0.118 | 0.059 | 0.329 |
| Rmeas | 0.124 | 0.062 | 0.344 |
| Rpim | 0.037 | 0.019 | 0.102 |
| Total number of observations | 484354 | ||
| Number of reflections | 44002 | ||
| <I/σ(I)> | 8.8 | ||
| Completeness [%] | 95.8 | 99.9 | 100 |
| Redundancy | 11 | 10.8 | 11.3 |
| CC(1/2) | 0.997 | 0.970 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 8.5 | 289 | 0.1 M Sodium cacodylate trihydrate(pH 6.5), 1.4 M Sodium acetate trihydrate |
