5JIK
Crystal structure of HER2 binding IgG1-Fc (Fcab H10-03-6)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-16 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.976254 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.741, 79.808, 140.872 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.903 - 1.820 |
R-factor | 0.2278 |
Rwork | 0.225 |
R-free | 0.25940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jih |
RMSD bond length | 0.006 |
RMSD bond angle | 0.898 |
Data reduction software | XDS (VERSION January 10, 2014) |
Data scaling software | XDS (VERSION January 10, 2014) |
Phasing software | PHENIX (dev_1894) |
Refinement software | PHENIX (dev_2247) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.903 | 1.885 |
High resolution limit [Å] | 1.820 | 1.820 |
Rmerge | 0.072 | 4.875 |
Number of reflections | 51065 | |
<I/σ(I)> | 11.72 | 0.46 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.5 | 6.7 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 295 | 0.05 M HEPES, 24% (w/v) PEG 3350 |