5JI8
Crystal structure of the BRD9 bromodomain and hit 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-01-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.978 |
Spacegroup name | P 1 |
Unit cell lengths | 24.498, 34.090, 39.519 |
Unit cell angles | 70.09, 75.28, 73.24 |
Refinement procedure
Resolution | 28.107 - 1.420 |
R-factor | 0.1507 |
Rwork | 0.150 |
R-free | 0.17040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hme |
RMSD bond length | 0.009 |
RMSD bond angle | 0.907 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.440 |
High resolution limit [Å] | 1.420 | 3.850 | 1.420 |
Rmerge | 0.050 | 0.040 | 0.202 |
Number of reflections | 20295 | ||
<I/σ(I)> | 10.3 | ||
Completeness [%] | 94.9 | 96.8 | 93 |
Redundancy | 2.3 | 2.4 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 293 | 0.1M Bis-Tris PH6.4, 27% PEG 3350 |