Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JF1

Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with actinonin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
Collection date2008-02-23
DetectorADSC QUANTUM 4r
Wavelength(s)0.934
Spacegroup nameP 21 21 21
Unit cell lengths40.840, 66.160, 88.860
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.410 - 2.000
R-factor0.1536
Rwork0.151
R-free0.19805
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2aie
RMSD bond length0.031
RMSD bond angle2.393
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.110
High resolution limit [Å]1.9901.990
Rmerge0.408
Number of reflections17013
<I/σ(I)>14.145.62
Completeness [%]98.893.4
Redundancy6.976.94
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52939% PEG-8000, 100mM Na Cacodylate pH6.5, 400mM Zn acetate

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon