5J61
D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E SUPERBRIGHT |
| Temperature [K] | 93 |
| Detector technology | IMAGE PLATE |
| Collection date | 2011-05-09 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 57.156, 86.439, 138.163 |
| Unit cell angles | 90.00, 96.39, 90.00 |
Refinement procedure
| Resolution | 25.000 - 2.100 |
| R-factor | 0.22251 |
| Rwork | 0.220 |
| R-free | 0.26963 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3knf |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.194 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.000 | 2.180 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.112 | 0.876 |
| Number of reflections | 75606 | |
| <I/σ(I)> | 14.7 | |
| Completeness [%] | 96.5 | |
| Redundancy | 4.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 28% PEG 3350, 0.4M sodium chloride, 0.1M HEPES, pH 7.5 |
