5IRN
Crystal structure of rabbit NOD2 in an ADP-bound state (Crystal form1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.815, 106.162, 185.393 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 92.700 - 2.340 |
R-factor | 0.20329 |
Rwork | 0.202 |
R-free | 0.23585 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.507 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 92.700 |
High resolution limit [Å] | 2.300 |
Number of reflections | 57510 |
<I/σ(I)> | 29.7 |
Completeness [%] | 92.6 |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 5% PEG 20000, 5% MPD, 100 mM Hepes pH 7.8, 500 mM NaCl |