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5IIM

Crystal structure of the pre-catalytic ternary extension complex of DNA polymerase lambda with an 8-oxo-dG:dA base-pair

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2009-01-17
DetectorADSC QUANTUM 315r
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths56.274, 63.700, 140.725
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.947 - 1.941
R-factor0.1866
Rwork0.183
R-free0.21590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xsn
RMSD bond length0.006
RMSD bond angle0.898
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.0301.947
High resolution limit [Å]1.9401.941
Rmerge0.0760.766
Number of reflections36628
<I/σ(I)>15.12.4
Completeness [%]99.7
Redundancy5.8
CC(1/2)0.9940.913
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2780.2 M ammonium acetate, 0.1 M sodium citrate pH 4.8, and 3-5% PEG 4000

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