5IGQ
WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2) bound to peptide from Trib1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Detector technology | CCD |
Collection date | 2014-04-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 247.646, 249.576, 124.512 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.766 - 3.900 |
R-factor | 0.2306 |
Rwork | 0.228 |
R-free | 0.27680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hqg |
RMSD bond length | 0.002 |
RMSD bond angle | 0.652 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.766 | 4.039 |
High resolution limit [Å] | 3.900 | 3.900 |
Rmerge | 0.069 | 0.733 |
Number of reflections | 35006 | |
<I/σ(I)> | 8 | 1.2 |
Completeness [%] | 98.0 | 100 |
Redundancy | 2 | 2 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M Bis-Tris pH 5.5, 20% glycerol, 5% PEG 5000 MME |