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5HTO

Crystal structure of Plasmodium Vivax LDH in complex with a DNA aptamer called pL1 (tetrameric LDH in an asymmetric unit)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2014-12-02
DetectorADSC QUANTUM 315
Wavelength(s)0.9796
Spacegroup nameP 21 21 21
Unit cell lengths85.512, 86.539, 209.128
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.999 - 1.900
R-factor0.1706
Rwork0.169
R-free0.20010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2a92
RMSD bond length0.009
RMSD bond angle1.110
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.00025.0001.930
High resolution limit [Å]1.9005.1401.900
Rmerge0.0830.0420.288
Number of reflections122668
<I/σ(I)>16.2
Completeness [%]100.099.6100
Redundancy14.613.814.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.15PEG-20K, magnesium ion, HEPES, Tirs, PEG-400

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