5HP3
Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA sequence derived from S. cerevisiae BDF2 gene with AC mismatch at reaction site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 81.510, 107.210, 120.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.327 - 3.091 |
R-factor | 0.1668 |
Rwork | 0.163 |
R-free | 0.23790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zy7 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.365 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.140 | 3.170 |
High resolution limit [Å] | 3.090 | 3.090 |
Rmerge | 0.116 | 0.687 |
Number of reflections | 19369 | |
<I/σ(I)> | 10.56 | 1.75 |
Completeness [%] | 96.8 | 89.1 |
Redundancy | 3.31 | 3.19 |
CC(1/2) | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 10% PEG3350, 15% glycerol, 0.1 M MES/NaOH, pH 6.5 |