5HKC
Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with 8-mer RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 48.269, 38.798, 69.178 |
Unit cell angles | 90.00, 107.30, 90.00 |
Refinement procedure
Resolution | 33.453 - 1.680 |
R-factor | 0.203 |
Rwork | 0.201 |
R-free | 0.23190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MazF-mt3 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.179 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.710 |
High resolution limit [Å] | 1.680 | 4.560 | 1.680 |
Rmerge | 0.051 | 0.029 | 0.458 |
Rmeas | 0.061 | 0.035 | 0.570 |
Rpim | 0.034 | 0.019 | 0.334 |
Total number of observations | 74834 | ||
Number of reflections | 27052 | ||
<I/σ(I)> | 10.9 | ||
Completeness [%] | 95.9 | 88.7 | 98.2 |
Redundancy | 2.8 | 2.9 | 2.7 |
CC(1/2) | 0.998 | 0.723 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 0.2 M Lithium sulfate, 0.1 M Bis-Tris, 25% PEG3350 |