5HK3
Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-12 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.311, 64.244, 73.915 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.526 - 1.560 |
R-factor | 0.1926 |
Rwork | 0.192 |
R-free | 0.20690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MazF-mt3 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.070 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.590 |
High resolution limit [Å] | 1.560 | 4.230 | 1.560 |
Rmerge | 0.089 | 0.078 | 0.407 |
Rmeas | 0.107 | 0.097 | 0.503 |
Rpim | 0.059 | 0.057 | 0.290 |
Total number of observations | 105841 | ||
Number of reflections | 32174 | ||
<I/σ(I)> | 14.8 | ||
Completeness [%] | 98.2 | 83.5 | 87.7 |
Redundancy | 3.3 | 2.6 | 2.6 |
CC(1/2) | 0.982 | 0.778 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 0.1 M Bis-Tris 0.1 M Ammonium acetate 17% PEG 10000 |