Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HGP

Hexameric HIV-1 CA in complex with hexacarboxybenzene

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-08-21
DetectorRIGAKU RAXIS HTC
Wavelength(s)1.5418
Spacegroup nameP 6
Unit cell lengths90.759, 90.759, 56.760
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.380 - 1.950
R-factor0.195
Rwork0.194
R-free0.22060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3h4e
RMSD bond length0.008
RMSD bond angle1.281
Data reduction softwareiMOSFLM
Data scaling softwareAimless (0.5.14)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0131)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.38045.3802.000
High resolution limit [Å]1.9508.9401.950
Rmerge0.1050.0430.862
Rpim0.0430.0170.368
Total number of observations12994013668862
Number of reflections19152
<I/σ(I)>11.732.22.1
Completeness [%]97.989.599.5
Redundancy6.86.96.5
CC(1/2)0.9970.9990.644
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5290PEG550MME (13-14%), KSCN (0.15M), TRIS (0.1M, pH 8.5), Mellitic acid (1mM). Mellitic acid stock was adjusted to pH 8.0 with TRIS prior to setting up trays.

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon