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5GIP

Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2013-05-11
DetectorADSC QUANTUM 315r
Wavelength(s)0.97915
Spacegroup nameP 1
Unit cell lengths97.916, 97.718, 128.793
Unit cell angles108.98, 104.42, 89.86
Refinement procedure
Resolution24.859 - 3.129
R-factor0.1796
Rwork0.178
R-free0.23380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3pla
RMSD bond length0.013
RMSD bond angle1.479
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0003.210
High resolution limit [Å]3.1203.130
Rmerge0.087
Number of reflections74336
<I/σ(I)>22.5
Completeness [%]97.3
Redundancy2.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2931.7M DL-malic acid, 0.1M potassium sodium tartrate tetrahydrate

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PDB entries from 2024-07-10

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