5GIN
Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-09-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9789 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 242.676, 242.676, 146.898 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.999 - 3.308 |
R-factor | 0.2531 |
Rwork | 0.250 |
R-free | 0.30310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pla |
RMSD bond length | 0.013 |
RMSD bond angle | 1.711 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.360 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.131 | |
Number of reflections | 63174 | |
<I/σ(I)> | 12 | |
Completeness [%] | 96.5 | |
Redundancy | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 2.0 M ammonium sulfate, 2% v/v PEG 400, 10 mM magnesium chloride, 0.1 M HEPES |