5FOD
Crystal structure of the P.falciparum cytosolic leucyl-tRNA synthetase editing domain (space group P1) containing deletions of insertions 1 and 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-02 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 1 |
Unit cell lengths | 48.600, 53.100, 62.700 |
Unit cell angles | 88.40, 73.70, 89.80 |
Refinement procedure
Resolution | 60.160 - 1.700 |
R-factor | 0.20517 |
Rwork | 0.203 |
R-free | 0.25506 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PLASMODIUM KNOWLESI LEURS EDITING DOMAIN |
RMSD bond length | 0.014 |
RMSD bond angle | 1.607 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 1.750 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.090 | 0.900 |
Number of reflections | 62051 | |
<I/σ(I)> | 6 | 0.8 |
Completeness [%] | 94.0 | 88 |
Redundancy | 2.7 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 0.1 M HEPES (PH 7.5), 20% (W/V) PEG 10000, AND 8% ETHYLENEGLYCOL |