5FBD
S1 nuclease from Aspergillus oryzae in complex with phosphate and 2'-deoxycytidine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SEALED TUBE |
| Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
| Temperature [K] | 120 |
| Detector technology | CCD |
| Collection date | 2013-10-13 |
| Detector | AGILENT ATLAS CCD |
| Wavelength(s) | 1.54056 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 43.040, 62.426, 84.118 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.080 - 1.750 |
| R-factor | 0.15288 |
| Rwork | 0.151 |
| R-free | 0.21159 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | our previous model of S1 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.706 |
| Data reduction software | CrysalisPro |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.080 | 1.780 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Rmerge | 0.061 | 0.376 |
| Number of reflections | 22221 | |
| <I/σ(I)> | 13.6 | 2.1 |
| Completeness [%] | 95.2 | 72.2 |
| Redundancy | 3.7 | 2.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 3.8 | 291 | 0.1 M Citric acid pH 3.8, 25% w/v Polyethylene glycol 3,350 |
