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5F5I

Crystal Structure of human JMJD2A complexed with KDOOA011340

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-08-07
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.92000
Spacegroup nameP 21 21 2
Unit cell lengths101.030, 149.580, 57.920
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.010 - 2.630
R-factor0.2124
Rwork0.211
R-free0.24330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2oq7
RMSD bond length0.008
RMSD bond angle1.212
Data reduction softwareXDS
Data scaling softwareAimless (0.1.29)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0131)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]54.01054.0102.700
High resolution limit [Å]2.63011.7602.630
Rmerge0.1050.0280.907
Rpim0.0430.0130.368
Total number of observations176830210813209
Number of reflections26629
<I/σ(I)>15.552.62.3
Completeness [%]99.298.499.8
Redundancy6.65.96.9
CC(1/2)0.9981.0000.728
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.92770.1M bis-tris pH 5.9 , 0.15M ammonium sulfate , 13% PEG3350

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