Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5F21

human CD38 in complex with nanobody MU375

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2012-11-07
DetectorADSC QUANTUM 315r
Wavelength(s)0.97852
Spacegroup nameP 21 21 21
Unit cell lengths45.149, 69.666, 123.476
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.900
R-factor0.165
Rwork0.163
R-free0.21070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yh3
RMSD bond length0.009
RMSD bond angle1.303
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.970
High resolution limit [Å]1.9004.0901.900
Rmerge0.0690.0370.614
Total number of observations191446
Number of reflections31133
<I/σ(I)>10.6
Completeness [%]99.398.398.1
Redundancy6.16.36.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52980.2 M Ammonium sulfate, 0.1 M BIS-TRIS, 25%(w/v) PEG3350

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon