Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EY0

Crystal structure of CodY from Staphylococcus aureus with GTP and Ile

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2012-05-23
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.894, 76.028, 158.023
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.941 - 1.600
R-factor0.1793
Rwork0.178
R-free0.20910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2B0L and 2B18
RMSD bond length0.007
RMSD bond angle1.076
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.630
High resolution limit [Å]1.6001.600
Rmerge0.0720.313
Number of reflections69602
<I/σ(I)>23.722.8
Completeness [%]94.392.8
Redundancy3.92.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.9293ammonium acetate, sodium citrate dehydrate, PEG400

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon